Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906141.1_cds_XP_016456352.1_50193
CDS Infomation

[gene=LOC107780340] [db_xref=GeneID:107780340] [protein=DUF21 domain-containing protein At2g14520-like isoform X2] [protein_id=XP_016456352.1] [location=complement(join(52660..52701,52794..53056,53138..53265,54092..54165,55044..55131,55268..55407,55648..55734,55890..56003,56385..56468,56561..56637,57075..57209,57544..57586))] [gbkey=CDS]
Sequence

ATGGCGGTAGAGTACAGATGTTGCGAGTCGGAGTTCTTCATTCATATTTTGGTCATTGTA
TTTTTGGTAGTATTCGCGGGAATGATGTCTGGCCTTACATTGGGCCTCATGTCGTTAAGT
CTTGTTGATCTTGAAGTCCTTGCCAAGTCTGGAACTCCAAGTGATCGTAAAAATGCTGCC
AAGATATTGCCTGTTGTACAAAACCAGCATTTGTTGCTCTGCACCCTACTTATCTGCAAT
GCTGCTGCTATGGAGGCACTTCCCATCTTTCTTGACAGCCTAATAACAGCTTGGGGTGCT
ATACTGATTTCTGTCACATTGATTCTTCTATTTGGTGAGATCATTCCACAATCCGTTTGC
TCTAGATATGGACTGGCCATTGGTGCAACTATGGCCCCAGTTGTCCGCGTTCTTGTTTGG
ATCTGCTTTCCGATTGCATATCCAATAAGCAAGCTATTAGACTATCTGCTAGGTCATCGA
AACAGTGGTCTTTTCCGACGAGCTGAGTTGAAAACTTTAGTACATTTTCATGGAAATCAG
GCTGGTAAAGGTGGAGAACTAACAAATGATGAGACAACTATAATTGCTGGTGCTCTGGAG
CTTCACGATAAAACAGCCGGTGATGCTATGACCCCCATATCTGAAACCTTTTCTATTGAT
ATTAATGGGAAGTTGGACAGGGATTTGACGAATTTAATTTTGTCGAAAGGGCATAGCAGG
ATACCAGTCTACTATGAGCAACCTAAAAACATAATTGGACTTCTTCTGGTCAAGAACTTA
TTAACCATCCATCCAGAAGATGAAACCCCTGTAAAAAATGTTACTATCCGAAAGATCCCA
AGGGTCCCATATACTATGCGATTGGATGACATCTTGAATGAGTTTCAGAAAGGTCATAGT
CATATGGCTGTGGTTGTAAGACAGTGCAACAAAGAGATGGTTCAACCTGCTCGCCAAGCC
GATGCTGATGATTCTGTTCAAGATGTCAGAGTAGACATTGATGTTGAAAAGCCTCCGCTG
GAGAAGAGCATGAAGAGTAGATCATTGCAGAAGTGCAAGAGTTTGCCCAATGGTGGAAAC
GCTTCATCCAAAAGAAATAGGAGCAGGAGGACGTGGTCAAAAGATATGCAATCAGACATT
CTGCGAATAGACGAAACTCTGCCAAATATCCCTGATGAGGAAGAAGTTGTCGGGATAATA
ACAATGGAAGATGTTATTGAAGAGCTTTTACAGGAGGAAATTTTCGACGAGACTGATCAT
GCAAAGCATTTGTAG

Peptide Sequence

PEP ID

XP_016456352.1
PEP Infomation

PREDICTED: DUF21 domain-containing protein At2g14520-like isoform X2 [Nicotiana tabacum]
Sequence

MAVEYRCCESEFFIHILVIVFLVVFAGMMSGLTLGLMSLSLVDLEVLAKSGTPSDRKNAA
KILPVVQNQHLLLCTLLICNAAAMEALPIFLDSLITAWGAILISVTLILLFGEIIPQSVC
SRYGLAIGATMAPVVRVLVWICFPIAYPISKLLDYLLGHRNSGLFRRAELKTLVHFHGNQ
AGKGGELTNDETTIIAGALELHDKTAGDAMTPISETFSIDINGKLDRDLTNLILSKGHSR
IPVYYEQPKNIIGLLLVKNLLTIHPEDETPVKNVTIRKIPRVPYTMRLDDILNEFQKGHS
HMAVVVRQCNKEMVQPARQADADDSVQDVRVDIDVEKPPLEKSMKSRSLQKCKSLPNGGN
ASSKRNRSRRTWSKDMQSDILRIDETLPNIPDEEEVVGIITMEDVIEELLQEEIFDETDH
AKHL

Transcript Sequence

Gene sequence data has not been registered.